STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1701g39RuvB-like helicase; Belongs to the RuvB family. (468 aa)    
Predicted Functional Partners:
BVC80_1591g59
RuvB-like helicase; Belongs to the RuvB family.
  
0.997
BVC80_1543g172
SANT/Myb domain.
   
 0.982
BVC80_8539g8
Actin-related protein; Belongs to the actin family.
   
 0.980
BVC80_1707g172
YL1 nuclear.
    
 0.973
BVC80_8571g7
SNF2-related.
   
 0.972
BVC80_1821g117
YL1 nuclear.
    
 0.968
BVC80_8703g1
Actin-related protein; Belongs to the actin family.
   
 0.965
BVC80_8873g15
Phosphatidylinositol 3-/4-kinase; Belongs to the PI3/PI4-kinase family.
   
 0.961
BVC80_949g62
Nop domain.
   
 
 0.960
BVC80_1543g237
INO80 complex subunit B-like conserved region.
    
 0.959
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.