STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1707g103Plant organelle RNA recognition domain. (420 aa)    
Predicted Functional Partners:
BVC80_4379g1
Uncharacterized protein.
  
     0.524
BVC80_8951g46
Uncharacterized protein.
  
     0.508
BVC80_1799g5
Uncharacterized protein.
  
     0.507
BVC80_1323g5
Uncharacterized protein.
  
     0.502
BVC80_8325g10
Uncharacterized protein.
  
     0.480
BVC80_9009g12
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.477
BVC80_8399g10
RAP domain.
  
     0.474
BVC80_8201g5
Uncharacterized protein.
  
     0.474
BVC80_1719g14
Late embryogenesis abundant protein.
  
     0.473
BVC80_1289g44
Late embryogenesis abundant protein.
  
     0.473
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.