STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_8865g1Cyclic nucleotide-binding domain. (845 aa)    
Predicted Functional Partners:
BVC80_8951g29
EF-hand domain.
    
 0.566
BVC80_6665g1
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 
 0.505
BVC80_1331g12
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 
 0.505
BVC80_931g5
Amino acid transporter.
      
 0.449
BVC80_41g6
Recoverin.
   
 
 0.431
BVC80_9093g85
Potassium transporter; Potassium transporter; Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.
      
 0.426
BVC80_1827g105
Voltage-dependent anion channel.
      
 0.422
BVC80_1553g9
Amino acid transporter.
      
 0.416
BVC80_59g27
Ankyrin repeat.
  
     0.414
BVC80_1733g18
Tetratricopeptide TPR-1.
  
 
   0.402
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.