STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_8399g56-phosphogluconate dehydrogenase. (291 aa)    
Predicted Functional Partners:
BVC80_3g33
Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.930
BVC80_1741g134
Isocitrate lyase.
     
 0.906
BVC80_441g58
Peptidase M20.
    
  0.903
BVC80_1837g387
Malate synthase; Belongs to the malate synthase family.
   
 
 0.897
BVC80_209g159
6-phosphogluconate dehydrogenase.
  
  
 
0.896
BVC80_233g50
Aminotransferase.
     
 0.896
BVC80_1737g26
Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.891
BVC80_1837g34
Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.891
BVC80_157g152
D-isomer specific 2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.881
BVC80_157g154
D-isomer specific 2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.881
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.