STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_805g9Transferase. (283 aa)    
Predicted Functional Partners:
BVC80_909g5
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.895
BVC80_1485g42
AMP-dependent synthetase/ligase.
    
 0.770
BVC80_1551g28
AMP-dependent synthetase/ligase.
    
 0.768
BVC80_9095g44
AMP-dependent synthetase/ligase.
    
 0.766
BVC80_521g138
AMP-dependent synthetase/ligase.
   
 0.759
BVC80_1331g10
NAD-dependent epimerase/dehydratase.
   
 0.748
BVC80_8937g12
AMP-dependent synthetase/ligase.
    
 0.747
BVC80_1313g36
O-methyltransferase.
   
 
 0.741
BVC80_1767g36
Cytochrome P450; Belongs to the cytochrome P450 family.
     
 0.739
BVC80_1211g46
Alpha/beta hydrolase fold-1.
     
 0.711
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.