STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_787g22Uncharacterized protein. (128 aa)    
Predicted Functional Partners:
BVC80_1611g33
Uncharacterized protein.
  
   
 0.585
BVC80_8733g16
Uncharacterized protein.
      
0.481
BVC80_437g10
ARID/BRIGHT DNA-binding domain.
      
 0.463
BVC80_8463g3
ARID/BRIGHT DNA-binding domain.
      
 0.463
BVC80_8809g29
ARID/BRIGHT DNA-binding domain.
      
 0.463
BVC80_373g6
SANT/Myb domain.
      
 0.459
BVC80_9085g3
Histidine phosphatase superfamily.
      
 0.444
BVC80_1519g11
COBRA.
      
 0.422
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.