Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVC80_1551g30 | BVC80_1609g39 | A0A200QY34 | A0A200Q9V8 | WD40 repeat. | Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.975 |
BVC80_1551g30 | BVC80_1827g57 | A0A200QY34 | A0A200QB55 | WD40 repeat. | Eukaryotic rRNA processing. | 0.997 |
BVC80_1551g30 | BVC80_757g44 | A0A200QY34 | A0A200QRZ7 | WD40 repeat. | Brix domain. | 0.997 |
BVC80_1551g30 | BVC80_7725g7 | A0A200QY34 | A0A200Q1D8 | WD40 repeat. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.999 |
BVC80_1551g30 | BVC80_8573g3 | A0A200QY34 | A0A200QM36 | WD40 repeat. | RNA recognition motif domain. | 0.993 |
BVC80_1551g30 | BVC80_8991g36 | A0A200QY34 | A0A200QBN0 | WD40 repeat. | CCAAT-binding factor. | 0.986 |
BVC80_1551g30 | BVC80_9077g110 | A0A200QY34 | A0A200PLT3 | WD40 repeat. | RNA helicase. | 0.900 |
BVC80_1551g30 | BVC80_9083g88 | A0A200QY34 | A0A200PRE4 | WD40 repeat. | WD40 repeat. | 0.997 |
BVC80_1551g30 | BVC80_9087g45 | A0A200QY34 | A0A200PQT5 | WD40 repeat. | Ribosomal protein L24e-related. | 0.993 |
BVC80_1551g30 | BVC80_949g62 | A0A200QY34 | A0A200QX49 | WD40 repeat. | Nop domain. | 0.918 |
BVC80_1609g39 | BVC80_1551g30 | A0A200Q9V8 | A0A200QY34 | Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | WD40 repeat. | 0.975 |
BVC80_1609g39 | BVC80_1827g57 | A0A200Q9V8 | A0A200QB55 | Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Eukaryotic rRNA processing. | 0.992 |
BVC80_1609g39 | BVC80_757g44 | A0A200Q9V8 | A0A200QRZ7 | Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Brix domain. | 0.986 |
BVC80_1609g39 | BVC80_7725g7 | A0A200Q9V8 | A0A200Q1D8 | Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.992 |
BVC80_1609g39 | BVC80_8573g3 | A0A200Q9V8 | A0A200QM36 | Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | RNA recognition motif domain. | 0.992 |
BVC80_1609g39 | BVC80_8991g36 | A0A200Q9V8 | A0A200QBN0 | Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | CCAAT-binding factor. | 0.980 |
BVC80_1609g39 | BVC80_9077g110 | A0A200Q9V8 | A0A200PLT3 | Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | RNA helicase. | 0.979 |
BVC80_1609g39 | BVC80_9083g88 | A0A200Q9V8 | A0A200PRE4 | Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | WD40 repeat. | 0.981 |
BVC80_1609g39 | BVC80_9087g45 | A0A200Q9V8 | A0A200PQT5 | Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Ribosomal protein L24e-related. | 0.982 |
BVC80_1609g39 | BVC80_949g62 | A0A200Q9V8 | A0A200QX49 | Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Nop domain. | 0.975 |
page 1 of 6