STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_8739g6Helicase. (1076 aa)    
Predicted Functional Partners:
BVC80_9079g85
Zinc finger protein.
    
 0.975
BVC80_1717g36
Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain.
   
 0.968
BVC80_577g18
MIF4G-like.
   
 0.968
BVC80_1363g3
THO complex.
   
 0.963
BVC80_9093g61
PHF5-like.
    
 0.947
BVC80_9001g28
KOW.
    
 0.944
BVC80_237g54
G-patch domain.
    
 0.944
BVC80_9087g38
PSP.
   
 0.939
BVC80_1581g1
Bud13.
   
 0.939
BVC80_1835g357
Zinc finger protein.
    
 0.939
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.