STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_339g2Transcription factor. (170 aa)    
Predicted Functional Partners:
BVC80_5239g1
Zinc finger protein.
    
   0.901
BVC80_1787g165
Transcription factor CBF/NF-Y/archaeal histone.
  
 0.891
BVC80_7821g8
Transcription factor CBF/NF-Y/archaeal histone.
  
 0.887
BVC80_441g284
Transcription factor CBF/NF-Y/archaeal histone.
  
 0.885
BVC80_9037g56
Transcription factor CBF/NF-Y/archaeal histone.
  
 0.885
BVC80_901g25
CCAAT-binding transcription factor.
  
 0.817
BVC80_1173g6
CCAAT-binding transcription factor.
  
 0.817
BVC80_7407g1
CCAAT-binding transcription factor.
  
 0.817
BVC80_625g6
CCAAT-binding transcription factor.
  
 0.816
BVC80_8603g2
CCAAT-binding transcription factor.
   
 0.773
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.