STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_209g9Aminotransferase. (483 aa)    
Predicted Functional Partners:
BVC80_8189g6
Aminotransferase.
  
 0.954
BVC80_1325g8
Aspartate aminotransferase.
   
 0.950
BVC80_1803g4
Aspartate aminotransferase.
   
 0.950
BVC80_9069g97
Aspartate aminotransferase.
   
 0.941
BVC80_157g147
Aspartate aminotransferase.
   
 0.941
BVC80_9003g13
Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
     
 0.934
BVC80_9043g3
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
 
 0.924
BVC80_9099g194
Aromatic amino acid beta-eliminating lyase/threonine aldolase.
  
 
 0.922
BVC80_33g4
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
 
 0.922
BVC80_1737g26
Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 0.919
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.