STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_209g114Zinc finger protein. (254 aa)    
Predicted Functional Partners:
BVC80_695g36
B30.2/SPRY domain.
   
 
 0.786
BVC80_8551g15
Uncharacterized protein.
    
 
 0.778
BVC80_969g18
SWIB/MDM2 domain.
    
 
 0.739
BVC80_1459g10
WD40 repeat.
    
 
 0.670
BVC80_8693g14
WD40 repeat.
    
 
 0.670
BVC80_8873g11
WD40 repeat.
    
 
 0.636
BVC80_887g72
WD40 repeat.
    
 
 0.636
BVC80_8539g8
Actin-related protein; Belongs to the actin family.
    
 
 0.573
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.