STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_209g92DnaJ domain. (217 aa)    
Predicted Functional Partners:
BVC80_8165g4
Uncharacterized protein.
  
 
 0.827
BVC80_441g101
Uncharacterized protein.
  
  
 0.668
BVC80_243g23
Uncharacterized protein.
  
  
 0.578
BVC80_1403g9
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
   
  
 0.557
BVC80_9097g33
Uncharacterized protein.
   
 
 0.524
BVC80_1527g7
NAD(P)H-quinone oxidoreductase subunit M.
   
  
 0.520
BVC80_1519g43
DnaJ domain.
   
  
 0.512
BVC80_1787g139
Uncharacterized protein.
  
     0.509
BVC80_1741g169
Zinc finger protein.
  
     0.507
BVC80_8983g42
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
   
  
 0.490
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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