STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_209g203Bacterial transferase hexapeptide repeat. (296 aa)    
Predicted Functional Partners:
BVC80_1769g3
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 
 0.946
BVC80_8785g15
Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily.
   
 0.941
BVC80_8895g22
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 
 0.941
BVC80_8807g18
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 
 0.940
BVC80_1787g59
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 
 0.934
BVC80_8787g15
Uncharacterized protein.
    
 0.918
BVC80_1087g3
Cys/Met metabolism.
    
 0.918
BVC80_7827g3
Homoserine dehydrogenase.
     
 0.915
BVC80_9085g55
Homoserine kinase.
     
 0.909
BVC80_7783g1
Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily.
    
 0.909
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.