STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_209g305Protein kinase domain. (695 aa)    
Predicted Functional Partners:
BVC80_1195g53
Uncharacterized protein.
    
 0.873
BVC80_9087g72
Bystin.
    
 0.794
BVC80_1223g9
RIO kinase.
    
 0.783
BVC80_9051g49
Ribosome biogenesis protein BMS1/TSR1.
    
 0.686
BVC80_881g6
Nin one binding (NOB1) Zn-ribbon-like.
    
 0.663
BVC80_157g82
Cyclic nucleotide-binding domain.
    
 0.611
BVC80_9097g114
Ribosomal protein S4/S9; Belongs to the universal ribosomal protein uS4 family.
    
  0.573
BVC80_285g55
Ribosomal protein S4/S9; Belongs to the universal ribosomal protein uS4 family.
    
  0.573
BVC80_1837g325
Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
    
 0.566
BVC80_9079g34
Uncharacterized protein.
    
 0.563
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.