Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVC80_1117g66 | BVC80_1737g9 | A0A200Q9C6 | A0A200Q7Z6 | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | tRNA transferase Trm5/Tyw2. | 0.628 |
BVC80_1117g66 | BVC80_379g73 | A0A200Q9C6 | A0A200QSX8 | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | WD40 repeat. | 0.929 |
BVC80_1117g66 | BVC80_8835g15 | A0A200Q9C6 | A0A200RE26 | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | Putative RNA methylase domain. | 0.616 |
BVC80_1117g66 | BVC80_9041g10 | A0A200Q9C6 | A0A200R2R1 | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.906 |
BVC80_1117g66 | BVC80_9097g98 | A0A200Q9C6 | A0A200QF10 | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | DUF2428 domain-containing protein. | 0.835 |
BVC80_1503g15 | BVC80_1737g9 | A0A200PM54 | A0A200Q7Z6 | Ribosomal RNA methyltransferase FtsJ domain. | tRNA transferase Trm5/Tyw2. | 0.628 |
BVC80_1503g15 | BVC80_379g73 | A0A200PM54 | A0A200QSX8 | Ribosomal RNA methyltransferase FtsJ domain. | WD40 repeat. | 0.929 |
BVC80_1503g15 | BVC80_8835g15 | A0A200PM54 | A0A200RE26 | Ribosomal RNA methyltransferase FtsJ domain. | Putative RNA methylase domain. | 0.616 |
BVC80_1503g15 | BVC80_9041g10 | A0A200PM54 | A0A200R2R1 | Ribosomal RNA methyltransferase FtsJ domain. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.906 |
BVC80_1503g15 | BVC80_9097g98 | A0A200PM54 | A0A200QF10 | Ribosomal RNA methyltransferase FtsJ domain. | DUF2428 domain-containing protein. | 0.835 |
BVC80_1737g9 | BVC80_1117g66 | A0A200Q7Z6 | A0A200Q9C6 | tRNA transferase Trm5/Tyw2. | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | 0.628 |
BVC80_1737g9 | BVC80_1503g15 | A0A200Q7Z6 | A0A200PM54 | tRNA transferase Trm5/Tyw2. | Ribosomal RNA methyltransferase FtsJ domain. | 0.628 |
BVC80_1737g9 | BVC80_1835g20 | A0A200Q7Z6 | A0A200R4L0 | tRNA transferase Trm5/Tyw2. | Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs. | 0.757 |
BVC80_1737g9 | BVC80_379g73 | A0A200Q7Z6 | A0A200QSX8 | tRNA transferase Trm5/Tyw2. | WD40 repeat. | 0.615 |
BVC80_1737g9 | BVC80_399g48 | A0A200Q7Z6 | A0A200R1D1 | tRNA transferase Trm5/Tyw2. | Ribosomal RNA methyltransferase FtsJ domain. | 0.628 |
BVC80_1737g9 | BVC80_8835g15 | A0A200Q7Z6 | A0A200RE26 | tRNA transferase Trm5/Tyw2. | Putative RNA methylase domain. | 0.661 |
BVC80_1737g9 | BVC80_9041g10 | A0A200Q7Z6 | A0A200R2R1 | tRNA transferase Trm5/Tyw2. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.666 |
BVC80_1737g9 | BVC80_9097g98 | A0A200Q7Z6 | A0A200QF10 | tRNA transferase Trm5/Tyw2. | DUF2428 domain-containing protein. | 0.625 |
BVC80_1829g17 | BVC80_9097g98 | A0A200QZ46 | A0A200QF10 | Nucleoporin. | DUF2428 domain-containing protein. | 0.627 |
BVC80_1835g20 | BVC80_1737g9 | A0A200R4L0 | A0A200Q7Z6 | Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs. | tRNA transferase Trm5/Tyw2. | 0.757 |
page 1 of 4