STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_8743g11Uncharacterized protein family UPF0402. (260 aa)    
Predicted Functional Partners:
BVC80_1837g43
GCN5-like 1.
   
 
 0.713
BVC80_9049g7
Biogenesis of lysosome-related organelles complex-1.
   
 
 0.634
BVC80_1773g65
Late embryogenesis abundant protein.
  
     0.500
BVC80_1321g34
Late embryogenesis abundant protein.
  
     0.493
BVC80_929g12
Uncharacterized protein.
  
     0.490
BVC80_9085g39
Uncharacterized protein.
  
     0.484
BVC80_8949g30
Exoribonuclease.
      
 0.482
BVC80_9101g318
SWAP/Surp.
      
 0.480
BVC80_1769g83
Splicing factor 3B subunit 1.
      
 0.480
BVC80_1835g379
Uncharacterized protein.
  
     0.475
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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