STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_9101g58Uncharacterized protein. (98 aa)    
Predicted Functional Partners:
BVC80_8085g5
SKA2 domain-containing protein.
  
     0.478
BVC80_441g109
Uncharacterized protein.
  
     0.439
BVC80_1831g193
EF-hand domain.
      
 0.436
BVC80_949g65
rRNA processing.
  
     0.418
BVC80_1831g288
Uncharacterized protein.
  
     0.418
BVC80_6999g3
Photosystem I PsaG/PsaK protein.
  
     0.413
BVC80_8983g14
UV radiation resistance protein/autophagy-related protein 14.
  
     0.405
BVC80_989g11
Uncharacterized protein.
  
     0.400
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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