STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_9101g308Rcd1. (340 aa)    
Predicted Functional Partners:
BVC80_1001g9
CCR4-Not complex component.
    
 0.987
BVC80_243g28
CCR4-Not complex component.
    
 0.986
BVC80_1259g6
Uncharacterized protein.
    
 0.950
BVC80_1651g71
NOT2/NOT3/NOT5.
    
 0.945
BVC80_1787g3
Uncharacterized protein.
    
 0.945
BVC80_1787g244
NOT2/NOT3/NOT5.
    
 0.945
BVC80_9097g224
Zinc finger protein.
    
 0.920
BVC80_1751g92
RNA recognition motif domain.
    
 0.920
BVC80_9023g22
Zinc finger protein.
    
 0.920
BVC80_1835g603
RNA recognition motif domain.
    
 0.920
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.