STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1753g18Ribosomal protein L34Ae. (233 aa)    
Predicted Functional Partners:
BVC80_9097g62
Amino acid transporter.
      
 0.483
BVC80_9099g112
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.478
BVC80_1255g5
Pectinesterase inhibitor domain.
  
     0.478
BVC80_1837g400
F-box domain.
  
     0.460
BVC80_1719g87
Auxin-induced protein.
  
     0.450
BVC80_9101g11
Cell morphogenesis protein C-terminal.
      
 0.448
BVC80_8937g8
Cell morphogenesis protein C-terminal.
      
 0.448
BVC80_9101g172
Uncharacterized protein.
  
     0.445
BVC80_1837g227
Uncharacterized protein.
  
     0.445
BVC80_209g41
Tify.
  
     0.442
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.