STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1591g51Hydrolase_4 domain-containing protein. (331 aa)    
Predicted Functional Partners:
BVC80_1775g23
2Fe-2S ferredoxin-type domain; Belongs to the complex I 75 kDa subunit family.
   
 
 0.825
BVC80_1117g16
4Fe-4S binding domain.
   
   0.758
BVC80_1833g136
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 
 0.749
BVC80_9095g25
Zinc finger protein.
   
   0.739
BVC80_1701g27
NADH dehydrogenase ubiquinone Fe-S protein 4.
   
   0.735
BVC80_8915g43
NADH dehydrogenase ubiquinone Fe-S protein 4.
   
   0.735
BVC80_1551g50
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
 
 0.728
BVC80_1837g370
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
 
 0.728
BVC80_209g208
NADH:ubiquinone oxidoreductase-like; Belongs to the complex I 20 kDa subunit family.
   
   0.727
BVC80_1723g10
Ribosomal protein/NADH dehydrogenase domain.
   
 
 0.718
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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