STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1593g2EF-hand domain. (160 aa)    
Predicted Functional Partners:
BVC80_8417g3
FERM domain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.828
BVC80_8951g29
EF-hand domain.
    
 0.704
BVC80_521g16
Uncharacterized protein.
   
 0.644
BVC80_1495g20
Transglutaminase-like.
    
 0.637
BVC80_9065g59
Peptidylprolyl isomerase.
   
 0.606
BVC80_881g10
4-diphosphocytidyl-2C-methyl-D-erythritol kinase.
     
 0.552
BVC80_205g4
Aminotransferase-like.
   
 0.551
BVC80_1599g7
Aminotransferase-like.
   
 0.551
BVC80_1733g13
Tetratricopeptide TPR-1.
    
 0.534
BVC80_1733g18
Tetratricopeptide TPR-1.
    
 0.534
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.