Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVC80_1065g163 | BVC80_1591g35 | A0A200RD11 | A0A200QIC3 | Phox/Bem1p. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.539 |
BVC80_1529g3 | BVC80_1591g35 | A0A200PMX6 | A0A200QIC3 | AP2/ERF domain. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.489 |
BVC80_1529g3 | BVC80_1663g67 | A0A200PMX6 | A0A200RBS8 | AP2/ERF domain. | OBERON-like protein; Probable transcription factor. | 0.521 |
BVC80_1529g3 | BVC80_1835g176 | A0A200PMX6 | A0A200R506 | AP2/ERF domain. | Uncharacterized protein. | 0.514 |
BVC80_1529g3 | BVC80_7757g3 | A0A200PMX6 | A0A200QKK8 | AP2/ERF domain. | FRIGIDA-like protein; Belongs to the Frigida family. | 0.504 |
BVC80_1529g3 | BVC80_7855g1 | A0A200PMX6 | A0A200QBJ5 | AP2/ERF domain. | Uncharacterized protein. | 0.516 |
BVC80_1543g46 | BVC80_1591g35 | A0A200R1L2 | A0A200QIC3 | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.539 |
BVC80_1591g35 | BVC80_1065g163 | A0A200QIC3 | A0A200RD11 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Phox/Bem1p. | 0.539 |
BVC80_1591g35 | BVC80_1529g3 | A0A200QIC3 | A0A200PMX6 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | AP2/ERF domain. | 0.489 |
BVC80_1591g35 | BVC80_1543g46 | A0A200QIC3 | A0A200R1L2 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.539 |
BVC80_1591g35 | BVC80_1663g67 | A0A200QIC3 | A0A200RBS8 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | OBERON-like protein; Probable transcription factor. | 0.501 |
BVC80_1591g35 | BVC80_1791g63 | A0A200QIC3 | A0A200QPV0 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.612 |
BVC80_1591g35 | BVC80_1835g176 | A0A200QIC3 | A0A200R506 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.512 |
BVC80_1591g35 | BVC80_209g276 | A0A200QIC3 | A0A200QDQ8 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.612 |
BVC80_1591g35 | BVC80_7757g3 | A0A200QIC3 | A0A200QKK8 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | FRIGIDA-like protein; Belongs to the Frigida family. | 0.477 |
BVC80_1591g35 | BVC80_7855g1 | A0A200QIC3 | A0A200QBJ5 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.489 |
BVC80_1591g35 | BVC80_9099g112 | A0A200QIC3 | A0A200PVT2 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.539 |
BVC80_1663g67 | BVC80_1529g3 | A0A200RBS8 | A0A200PMX6 | OBERON-like protein; Probable transcription factor. | AP2/ERF domain. | 0.521 |
BVC80_1663g67 | BVC80_1591g35 | A0A200RBS8 | A0A200QIC3 | OBERON-like protein; Probable transcription factor. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.501 |
BVC80_1663g67 | BVC80_1835g176 | A0A200RBS8 | A0A200R506 | OBERON-like protein; Probable transcription factor. | Uncharacterized protein. | 0.497 |
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