STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_8985g10Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family. (445 aa)    
Predicted Functional Partners:
BVC80_8921g8
Small GTPase superfamily.
   
 0.919
BVC80_9029g27
Small GTPase superfamily.
   
 0.919
BVC80_9069g76
Small GTPase superfamily.
    
 0.865
BVC80_9041g18
Small GTPase superfamily.
    
 0.865
BVC80_1831g247
Small GTPase superfamily.
    
 0.865
BVC80_157g165
Small GTPase superfamily.
    
 0.865
BVC80_9069g39
Small GTPase superfamily.
    
 0.851
BVC80_1731g51
Small GTPase superfamily.
   
 0.819
BVC80_1835g423
Small GTPase superfamily.
   
 0.819
BVC80_1659g10
Small GTPase superfamily.
    
 0.818
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.