STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_645g89Katanin p80 WD40 repeat-containing subunit B1 homolog; May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays; Belongs to the WD repeat KATNB1 family. (791 aa)    
Predicted Functional Partners:
KATNA1
Katanin p60 ATPase-containing subunit A1; Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
   
 
 0.927
BVC80_7609g5
AAA+ ATPase domain.
   
 
 0.924
BVC80_9089g112
AAA+ ATPase domain; Belongs to the AAA ATPase family.
   
 
 0.649
BVC80_8817g11
PPC domain-containing protein.
    
 
 0.638
BVC80_311g7
Glycerol kinase.
    
 
 0.638
BVC80_8937g23
Carbohydrate kinase.
    
 
 0.638
BVC80_8569g3
AAA+ ATPase domain; Belongs to the AAA ATPase family.
    
 
 0.638
BVC80_1741g40
Bromodomain.
    
 
 0.638
BVC80_8687g6
AAA+ ATPase domain.
    
 
 0.638
BVC80_8975g9
AAA+ ATPase domain; Belongs to the AAA ATPase family.
    
 
 0.638
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.