STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_8879g41Uncharacterized protein. (175 aa)    
Predicted Functional Partners:
BVC80_1289g93
The fantastic four family.
  
     0.530
BVC80_9099g24
Uncharacterized protein.
  
     0.526
BVC80_1827g64
AT hook.
  
     0.512
BVC80_6923g2
Uncharacterized protein.
  
     0.510
BVC80_3737g1
Uncharacterized protein.
  
     0.504
BVC80_1811g43
Uncharacterized protein.
  
     0.501
BVC80_695g20
DUF4408 domain-containing protein.
  
     0.500
BVC80_441g174
KIP1-like.
  
     0.500
BVC80_1815g11
Uncharacterized protein.
  
     0.499
BVC80_1695g10
Uncharacterized protein.
  
     0.489
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.