STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_7573g8Domain X. (124 aa)    
Predicted Functional Partners:
BVC80_1751g60
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
    
 
 0.569
BVC80_9061g20
Ribosomal protein L27/L41.
    
   0.562
BVC80_9099g100
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
    
   0.562
BVC80_733g29
Ribosomal protein/NADH dehydrogenase domain.
    
   0.562
BVC80_1395g63
Uncharacterized protein.
    
   0.562
BVC80_8869g13
CX9C domain-containing protein.
    
   0.562
BVC80_8649g13
Uncharacterized protein.
    
   0.562
BVC80_123g16
Ribosomal protein L30.
    
   0.562
BVC80_9097g22
Ribosomal protein L32p.
    
   0.562
BVC80_1791g41
Ribosomal protein S6.
    
   0.562
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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