STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_9007g11Uncharacterized protein. (305 aa)    
Predicted Functional Partners:
BVC80_9031g16
Uncharacterized protein.
  
     0.507
BVC80_1835g222
Uncharacterized protein.
  
 
   0.472
BVC80_9073g110
Uncharacterized protein.
  
     0.465
BVC80_1823g23
Uncharacterized protein.
  
    0.461
BVC80_8921g5
Vesicle transport protein.
   
 
 0.458
BVC80_8579g1
Vesicle transport protein.
   
 
 0.458
BVC80_577g7
Vesicle transport protein.
   
 
 0.458
BVC80_5g52
Glycosyltransferase AER61.
  
     0.454
BVC80_9063g65
Target SNARE coiled-coil domain.
    
 
 0.445
BVC80_479g79
Target SNARE coiled-coil domain; Belongs to the syntaxin family.
    
 
 0.445
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.