Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVC80_1639g15 | BVC80_9005g11 | A0A200Q6K4 | A0A200QLP9 | Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. | Phosphatase PHOSPHO-type. | 0.438 |
BVC80_1639g15 | BVC80_9065g40 | A0A200Q6K4 | A0A200PNI9 | Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. | 0.956 |
BVC80_1837g242 | BVC80_339g62 | A0A200R401 | A0A200QCA0 | Glycerophosphoryl diester phosphodiesterase. | Choline/Ethanolamine kinase. | 0.795 |
BVC80_1837g242 | BVC80_807g10 | A0A200R401 | A0A200QJC5 | Glycerophosphoryl diester phosphodiesterase. | Choline kinase. | 0.795 |
BVC80_1837g242 | BVC80_9005g11 | A0A200R401 | A0A200QLP9 | Glycerophosphoryl diester phosphodiesterase. | Phosphatase PHOSPHO-type. | 0.419 |
BVC80_339g62 | BVC80_1837g242 | A0A200QCA0 | A0A200R401 | Choline/Ethanolamine kinase. | Glycerophosphoryl diester phosphodiesterase. | 0.795 |
BVC80_339g62 | BVC80_521g78 | A0A200QCA0 | A0A200R9B7 | Choline/Ethanolamine kinase. | Cytidyltransferase-like domain. | 0.919 |
BVC80_339g62 | BVC80_9005g11 | A0A200QCA0 | A0A200QLP9 | Choline/Ethanolamine kinase. | Phosphatase PHOSPHO-type. | 0.436 |
BVC80_339g62 | BVC80_9045g45 | A0A200QCA0 | A0A200R386 | Choline/Ethanolamine kinase. | Cytidyltransferase-like domain. | 0.924 |
BVC80_339g62 | BVC80_9101g152 | A0A200QCA0 | A0A200QGP3 | Choline/Ethanolamine kinase. | Glycerophosphoryl diester phosphodiesterase. | 0.795 |
BVC80_521g78 | BVC80_339g62 | A0A200R9B7 | A0A200QCA0 | Cytidyltransferase-like domain. | Choline/Ethanolamine kinase. | 0.919 |
BVC80_521g78 | BVC80_807g10 | A0A200R9B7 | A0A200QJC5 | Cytidyltransferase-like domain. | Choline kinase. | 0.919 |
BVC80_521g78 | BVC80_9005g11 | A0A200R9B7 | A0A200QLP9 | Cytidyltransferase-like domain. | Phosphatase PHOSPHO-type. | 0.585 |
BVC80_521g78 | BVC80_9045g45 | A0A200R9B7 | A0A200R386 | Cytidyltransferase-like domain. | Cytidyltransferase-like domain. | 0.896 |
BVC80_807g10 | BVC80_1837g242 | A0A200QJC5 | A0A200R401 | Choline kinase. | Glycerophosphoryl diester phosphodiesterase. | 0.795 |
BVC80_807g10 | BVC80_521g78 | A0A200QJC5 | A0A200R9B7 | Choline kinase. | Cytidyltransferase-like domain. | 0.919 |
BVC80_807g10 | BVC80_9005g11 | A0A200QJC5 | A0A200QLP9 | Choline kinase. | Phosphatase PHOSPHO-type. | 0.436 |
BVC80_807g10 | BVC80_9045g45 | A0A200QJC5 | A0A200R386 | Choline kinase. | Cytidyltransferase-like domain. | 0.924 |
BVC80_807g10 | BVC80_9101g152 | A0A200QJC5 | A0A200QGP3 | Choline kinase. | Glycerophosphoryl diester phosphodiesterase. | 0.795 |
BVC80_9005g11 | BVC80_1639g15 | A0A200QLP9 | A0A200Q6K4 | Phosphatase PHOSPHO-type. | Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. | 0.438 |
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