STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1771g12ATP-dependent Clp protease proteolytic subunit. (225 aa)    
Predicted Functional Partners:
BVC80_8913g2
AAA+ ATPase domain.
 0.935
BVC80_8411g2
AAA+ ATPase domain.
 0.933
BVC80_417g50
AAA+ ATPase domain.
 0.933
BVC80_1827g73
Clp.
   
 
 0.714
BVC80_9083g42
ClpA/B family; Belongs to the ClpA/ClpB family.
   
 
 0.652
BVC80_1117g16
4Fe-4S binding domain.
   
 
 0.628
BVC80_1741g31
Trigger factor.
  
 
 0.573
BVC80_8853g16
ClpA/B family; Belongs to the ClpA/ClpB family.
   
 
 0.561
BVC80_379g87
ClpA/B family.
   
 
 0.561
BVC80_209g208
NADH:ubiquinone oxidoreductase-like; Belongs to the complex I 20 kDa subunit family.
   
 
 0.539
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.