STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1799g71Auxin-induced protein. (111 aa)    
Predicted Functional Partners:
BVC80_9081g79
Uncharacterized protein.
  
     0.476
BVC80_8889g24
RING-type E3 ubiquitin transferase.
  
     0.451
BVC80_8769g25
Uncharacterized protein.
  
     0.450
BVC80_9077g89
Transcription factor GRAS; Belongs to the GRAS family.
  
     0.444
BVC80_6941g2
Uncharacterized protein.
  
     0.420
BVC80_53g5
Phytosulfokine.
  
     0.418
BVC80_155g4
SAND domain.
  
     0.411
BVC80_8889g31
Pollen Ole e 1 allergen/extensin.
  
     0.400
BVC80_1765g19
Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain.
  
     0.400
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.