STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1795g14Glucose-methanol-choline oxidoreductase. (585 aa)    
Predicted Functional Partners:
BVC80_209g57
Aldehyde dehydrogenase domain; Belongs to the aldehyde dehydrogenase family.
  
 
 0.911
BVC80_37g5
LOB domain-containing protein.
     
 0.905
BVC80_1733g13
Tetratricopeptide TPR-1.
    
 0.900
BVC80_1733g18
Tetratricopeptide TPR-1.
    
 0.900
BVC80_1733g16
Tetratricopeptide TPR-1.
    
 0.900
BVC80_1733g8
Tetratricopeptide TPR-1.
    
 0.900
BVC80_9023g42
Aldehyde dehydrogenase domain; Belongs to the aldehyde dehydrogenase family.
  
 
 0.898
BVC80_8971g4
Aldehyde dehydrogenase domain; Belongs to the aldehyde dehydrogenase family.
  
 
 0.898
BVC80_1787g269
Membrane bound O-acyl transferase; Belongs to the membrane-bound acyltransferase family.
     
 0.895
BVC80_577g33
Patatin/Phospholipase A2-related.
    
  0.893
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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