STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_9011g48Thiamine pyrophosphate enzyme. (1653 aa)    
Predicted Functional Partners:
BVC80_8127g12
Glutamine amidotransferase.
  
 0.997
BVC80_1609g22
Indole-3-glycerol phosphate synthase.
  
 0.975
BVC80_9059g89
Indole-3-glycerol phosphate synthase.
  
 0.975
BVC80_9075g42
Glycosyl transferase.
  
 0.969
BVC80_887g77
Glycosyl transferase family 3.
  
 0.969
BVC80_9093g52
N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain.
  
 0.958
BVC80_213g11
Aminotransferase.
  
 
 0.956
BVC80_67g13
AMP-dependent synthetase/ligase.
   
 0.955
BVC80_1591g64
Chorismate synthase.
  
 
 0.954
BVC80_1837g221
Chorismate synthase.
  
 
 0.954
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.