STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_9017g37Ribosomal protein S23/S29. (462 aa)    
Predicted Functional Partners:
BVC80_9099g100
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 0.999
BVC80_8967g35
Ribosomal protein S16.
   
 0.998
BVC80_1741g31
Trigger factor.
   
 0.997
BVC80_9067g57
Ribosomal protein S24/S35.
   
 0.996
BVC80_1791g41
Ribosomal protein S6.
   
 0.995
BVC80_8893g45
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 0.990
BVC80_209g308
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 0.990
BVC80_9077g33
Ribosomal protein S18.
   
 0.987
BVC80_8875g16
Ribosomal protein S18.
   
 0.987
BVC80_9073g50
Uncharacterized protein.
   
 0.986
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.