STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_9019g38SNF2-related. (816 aa)    
Predicted Functional Partners:
BVC80_1825g37
SNF2-related.
  
  
 
0.910
BVC80_9093g162
SNF2-related.
  
  
0.900
BVC80_857g33
SNF2-related.
  
  
0.839
BVC80_1395g90
SNF2-related.
  
0.801
BVC80_8979g22
ERCC4 domain.
   
 0.791
BVC80_1547g11
RNA polymerase.
   
 0.766
BVC80_1591g59
RuvB-like helicase; Belongs to the RuvB family.
    
 0.752
BVC80_1503g12
Actin-related protein; Belongs to the actin family.
    
 0.750
BVC80_1725g37
DNA ligase.
   
 0.743
BVC80_1725g36
Uncharacterized protein.
   
 0.743
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.