STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1805g40Auxin-induced protein. (91 aa)    
Predicted Functional Partners:
BVC80_1663g3
Pathogenic type III effector avirulence factor Avr cleavage site.
  
     0.525
BVC80_1635g2
Uncharacterized protein.
  
     0.523
BVC80_8399g6
Uncharacterized protein.
  
     0.511
BVC80_8927g11
Uncharacterized protein.
  
     0.511
BVC80_8645g17
Uncharacterized protein.
  
     0.505
BVC80_9065g81
Uncharacterized protein.
  
     0.504
BVC80_1591g40
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.501
BVC80_8499g9
Transcription factor.
  
     0.500
BVC80_737g8
Putative S-adenosyl-L-methionine-dependent methyltransferase.
  
     0.499
BVC80_9047g70
GNAT domain.
  
     0.499
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.