STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_8947g14Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase. (798 aa)    
Predicted Functional Partners:
BVC80_1273g3
Ribosomal protein L2.
    
 
 0.790
BVC80_8289g4
Myb/SANT-like domain.
    
 
 0.790
BVC80_7033g1
Myb/SANT-like domain.
    
 
 0.790
BVC80_8997g16
Ribosomal protein L2.
    
 
 0.790
BVC80_8939g37
Uncharacterized protein.
    
 
 0.790
BVC80_6573g1
Ribosomal protein L2.
    
 
 0.604
BVC80_1065g183
Ribosomal protein L18e/L15P; Belongs to the universal ribosomal protein uL15 family.
    
 
 0.539
BVC80_887g85
Ribosomal protein L18e/L15P; Belongs to the universal ribosomal protein uL15 family.
    
 
 0.539
BVC80_233g31
JmjC domain.
      
 0.483
BVC80_1837g425
Uncharacterized protein.
  
     0.467
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.