STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_8917g8Gnk2-homologous domain. (248 aa)    
Predicted Functional Partners:
BVC80_205g28
Petal formation-expressed.
  
 
  0.540
BVC80_1785g21
Uncharacterized protein.
  
     0.538
BVC80_1583g16
Gibberellin regulated protein.
  
 
  0.536
BVC80_1663g21
FAS1 domain.
  
 
  0.534
BVC80_157g82
Cyclic nucleotide-binding domain.
    
 0.528
BVC80_1731g2
Adenylate cyclase-associated CAP.
  
 
   0.525
BVC80_9071g101
Uncharacterized protein.
  
     0.524
BVC80_205g50
Petal formation-expressed.
  
 
  0.524
BVC80_8725g12
Uncharacterized protein.
  
     0.514
BVC80_1543g119
Wall-associated receptor kinase galacturonan-binding domain.
  
     0.500
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.