STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_8917g9Gnk2-homologous domain. (100 aa)    
Predicted Functional Partners:
BVC80_8691g9
Ankyrin repeat-containing domain.
  
 
  0.574
BVC80_1741g3
Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain.
  
 
  0.555
BVC80_9035g33
Uncharacterized protein.
  
 
  0.536
BVC80_1835g487
Uncharacterized protein.
  
   0.531
BVC80_8545g4
F-box domain.
  
 
   0.528
BVC80_157g82
Cyclic nucleotide-binding domain.
    
 0.528
BVC80_8767g10
NB-ARC.
  
 
   0.524
BVC80_8961g22
Uncharacterized protein.
  
     0.523
BVC80_4199g2
Uncharacterized protein.
  
  0.523
BVC80_8627g10
Phox/Bem1p.
  
     0.522
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.