STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1787g44CCT domain. (376 aa)    
Predicted Functional Partners:
BVC80_1779g26
Uncharacterized protein.
    
 
 0.484
BVC80_9091g120
Tetratricopeptide repeat-containing domain.
    
 
 0.483
BVC80_9025g11
Uncharacterized protein.
    
 
 0.457
BVC80_27g2
Ubiquitin carboxyl-terminal hydrolases family 2; Belongs to the peptidase C19 family.
    
  0.450
BVC80_8895g19
Uncharacterized protein.
      
 0.437
BVC80_1831g176
SET domain.
    
 0.437
BVC80_8137g9
Uncharacterized protein.
      
 0.435
BVC80_1837g247
CID domain.
      
 0.435
BVC80_8961g34
DUF1421 domain-containing protein.
      
 0.426
BVC80_1017g2
TATA-box binding protein.
    
 0.411
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.