STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1817g19Helicase. (760 aa)    
Predicted Functional Partners:
BVC80_715g28
DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.
   
 
 0.788
BVC80_9085g58
Ribonuclease II/R; Belongs to the RNR ribonuclease family.
   
 
 0.788
BVC80_399g32
Ribonuclease II/R.
   
 
 0.788
BVC80_157g74
TRNase Z endonuclease.
   
  
 0.552
BVC80_1751g131
Helicase; Belongs to the DEAD box helicase family.
   
 
 0.485
BVC80_1289g102
Exoribonuclease.
   
 
 0.461
BVC80_243g35
Exoribonuclease.
   
 
 0.461
BVC80_233g8
Exoribonuclease.
   
 
 0.461
BVC80_9097g149
Lactamase_B domain-containing protein.
   
  
 0.433
BVC80_1755g15
Lactamase_B domain-containing protein.
   
  
 0.433
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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