Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVC80_1403g15 | BVC80_1665g45 | A0A200Q183 | A0A200RBJ1 | Uncharacterized protein. | Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. | 0.988 |
BVC80_1403g15 | BVC80_1743g6 | A0A200Q183 | A0A200QL39 | Uncharacterized protein. | Ribonucleoprotein LSM domain. | 0.987 |
BVC80_1403g15 | BVC80_379g6 | A0A200Q183 | A0A200QSQ8 | Uncharacterized protein. | Uncharacterized protein. | 0.987 |
BVC80_1403g15 | BVC80_8745g6 | A0A200Q183 | A0A200QG22 | Uncharacterized protein. | Small nuclear ribonucleoprotein E. | 0.713 |
BVC80_1403g15 | LSM3 | A0A200Q183 | A0A200QKA4 | Uncharacterized protein. | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.989 |
BVC80_1403g15 | LSM4 | A0A200Q183 | A0A200QWP3 | Uncharacterized protein. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.989 |
BVC80_1403g15 | LSM8 | A0A200Q183 | A0A200PXE0 | Uncharacterized protein. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.960 |
BVC80_1431g54 | BVC80_1665g45 | A0A200PZU5 | A0A200RBJ1 | Nop domain. | Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. | 0.991 |
BVC80_1431g54 | BVC80_1743g6 | A0A200PZU5 | A0A200QL39 | Nop domain. | Ribonucleoprotein LSM domain. | 0.984 |
BVC80_1431g54 | BVC80_379g6 | A0A200PZU5 | A0A200QSQ8 | Nop domain. | Uncharacterized protein. | 0.982 |
BVC80_1431g54 | BVC80_8745g6 | A0A200PZU5 | A0A200QG22 | Nop domain. | Small nuclear ribonucleoprotein E. | 0.988 |
BVC80_1431g54 | BVC80_9067g56 | A0A200PZU5 | A0A200PNT5 | Nop domain. | JAB/MPN domain. | 0.987 |
BVC80_1431g54 | LSM3 | A0A200PZU5 | A0A200QKA4 | Nop domain. | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.986 |
BVC80_1431g54 | LSM4 | A0A200PZU5 | A0A200QWP3 | Nop domain. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.987 |
BVC80_1431g54 | LSM8 | A0A200PZU5 | A0A200PXE0 | Nop domain. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.991 |
BVC80_1665g45 | BVC80_1403g15 | A0A200RBJ1 | A0A200Q183 | Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. | Uncharacterized protein. | 0.988 |
BVC80_1665g45 | BVC80_1431g54 | A0A200RBJ1 | A0A200PZU5 | Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. | Nop domain. | 0.991 |
BVC80_1665g45 | BVC80_1743g6 | A0A200RBJ1 | A0A200QL39 | Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. | Ribonucleoprotein LSM domain. | 0.998 |
BVC80_1665g45 | BVC80_379g6 | A0A200RBJ1 | A0A200QSQ8 | Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. | Uncharacterized protein. | 0.999 |
BVC80_1665g45 | BVC80_8745g6 | A0A200RBJ1 | A0A200QG22 | Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. | Small nuclear ribonucleoprotein E. | 0.994 |
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