STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_8497g1Glycosyl transferase. (381 aa)    
Predicted Functional Partners:
BVC80_1787g30
Mur ligase.
 
 
 0.982
BVC80_1787g96
Mur ligase.
 
 0.978
BVC80_875g6
Glycosyl transferase.
  
 
 0.933
BVC80_235g9
Glycosyl transferase.
  
 
 0.933
BVC80_577g33
Patatin/Phospholipase A2-related.
    
  0.887
BVC80_1289g68
Glycosyl transferase.
     
 0.838
BVC80_757g15
Uncharacterized protein.
     
 0.838
BVC80_8875g14
Glycosyl transferase.
    
 0.808
BVC80_8825g17
Glycosyl transferase.
    
 0.808
BVC80_1601g86
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
   
 
  0.796
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.