STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1313g16NmrA-like. (413 aa)    
Predicted Functional Partners:
BVC80_1117g16
4Fe-4S binding domain.
   
 0.922
BVC80_1833g136
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 0.911
BVC80_1775g23
2Fe-2S ferredoxin-type domain; Belongs to the complex I 75 kDa subunit family.
   
 0.906
BVC80_209g208
NADH:ubiquinone oxidoreductase-like; Belongs to the complex I 20 kDa subunit family.
   
 0.901
BVC80_1723g10
Ribosomal protein/NADH dehydrogenase domain.
   
 0.894
BVC80_1587g19
GRIM-19.
   
 0.893
BVC80_9027g7
NADH:ubiquinone oxidoreductase.
   
 0.886
BVC80_9095g25
Zinc finger protein.
   
 0.885
BVC80_8741g2
NADH-ubiquinone oxidoreductase.
   
 0.882
BVC80_1691g27
NAD(P)H-quinone oxidoreductase subunit J, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
   
 0.874
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.