STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1823g67Uncharacterized protein. (296 aa)    
Predicted Functional Partners:
BVC80_9095g64
Ribosomal protein L18/L5.
   
   0.903
BVC80_8895g27
Ribosomal protein L18/L5.
   
   0.903
BVC80_1183g38
Ribosomal protein L10e/L16.
   
 
 0.900
BVC80_8923g34
Ribosomal protein L10e/L16.
   
 
 0.900
BVC80_517g11
Ribosomal protein S17; Belongs to the universal ribosomal protein uS17 family.
   
   0.899
BVC80_7337g5
Ribosomal protein S17; Belongs to the universal ribosomal protein uS17 family.
   
   0.899
BVC80_9091g56
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
   0.898
BVC80_1211g33
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
   0.898
BVC80_9013g13
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
   0.898
BVC80_1337g4
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
   0.898
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.