STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_7337g5Ribosomal protein S17; Belongs to the universal ribosomal protein uS17 family. (160 aa)    
Predicted Functional Partners:
BVC80_8285g9
Glutathione S-transferase; Belongs to the GST superfamily.
   
   0.999
BVC80_1677g21
Plectin/S10.
   
 0.997
BVC80_8965g5
Ribosomal protein S12/S23.
  
 0.997
BVC80_209g54
Ribosomal protein S14.
  
 0.997
BVC80_9097g114
Ribosomal protein S4/S9; Belongs to the universal ribosomal protein uS4 family.
  
 0.997
BVC80_9013g13
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 0.997
BVC80_285g55
Ribosomal protein S4/S9; Belongs to the universal ribosomal protein uS4 family.
  
 0.997
BVC80_1787g18
Plectin/S10.
   
 0.997
BVC80_1313g35
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 0.997
BVC80_9047g59
Ribosomal protein S14.
  
 0.997
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.