STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_393g10Uncharacterized protein. (899 aa)    
Predicted Functional Partners:
BVC80_9053g2
Uncharacterized protein.
  
     0.487
BVC80_1501g3
Uncharacterized protein.
  
     0.483
BVC80_645g87
Uncharacterized protein.
  
    0.478
BVC80_9029g13
Uncharacterized protein.
  
     0.476
BVC80_1173g19
Uncharacterized protein.
  
     0.471
BVC80_1803g16
Uncharacterized protein.
  
     0.469
BVC80_1597g3
Uncharacterized protein.
  
     0.467
BVC80_8987g24
Ataxin 2.
  
     0.467
BVC80_1215g17
Uncharacterized protein.
  
     0.466
BVC80_8549g12
Uncharacterized protein.
  
     0.464
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.