STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1543g133Peroxin/Ferlin domain. (4294 aa)    
Predicted Functional Partners:
BVC80_1771g19
Zinc finger protein.
   
 
 0.571
BVC80_1825g30
Autophagy-related.
  
  
 0.570
BVC80_8873g15
Phosphatidylinositol 3-/4-kinase; Belongs to the PI3/PI4-kinase family.
  
  
 0.565
BVC80_9075g80
FMP27.
  
    0.520
BVC80_9065g15
BEACH domain.
  
  
 0.518
BVC80_1637g24
Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family.
  
   
 0.515
BVC80_9069g19
Uncharacterized protein.
  
  
 0.509
BVC80_1477g12
BEACH domain.
  
 
 0.504
BVC80_441g143
BEACH domain.
  
 
 0.503
BVC80_1229g23
Phox homologous domain.
  
 
 
 0.503
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.