STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1543g185Importin subunit alpha; Belongs to the importin alpha family. (535 aa)    
Predicted Functional Partners:
BVC80_1819g36
Importin-beta.
   
 0.947
BVC80_1101g59
Importin-beta.
   
 0.874
BVC80_1485g28
Importin-beta.
   
 0.874
BVC80_9093g118
Importin-beta.
   
 0.871
BVC80_9029g42
MIF4G-like.
   
 
 0.825
BVC80_1065g160
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.795
BVC80_1183g31
Nuclear cap-binding protein subunit 2.
    
 
 0.790
BVC80_8929g15
Ran binding domain.
   
 
 0.763
BVC80_9009g8
HRDC domain.
    
   0.716
BVC80_243g56
HRDC domain.
    
   0.716
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.