STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_9045g55Histidine triad (HIT) protein. (139 aa)    
Predicted Functional Partners:
BVC80_205g19
Phosphoadenosine phosphosulfate reductase.
   
  0.926
BVC80_8645g8
Phosphoadenosine phosphosulfate reductase.
   
  0.926
BVC80_909g5
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
  0.921
BVC80_1707g64
Protein-tyrosine phosphatase/arsenate reductase.
   
 
  0.736
BVC80_209g187
Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase.
     
 0.722
BVC80_41g10
Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase.
     
 0.722
BVC80_1017g2
TATA-box binding protein.
    
 0.679
BVC80_243g18
TATA-box binding protein.
    
 0.679
BVC80_8827g15
RNA polymerase I specific transcription initiation factor RRN3.
    
 0.662
BVC80_1837g337
Oxidoreductase.
   
  0.636
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.