STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1305g7Uncharacterized protein. (106 aa)    
Predicted Functional Partners:
BVC80_1837g284
Uncharacterized protein.
  
     0.503
BVC80_1831g297
Uncharacterized protein.
  
     0.494
BVC80_9077g5
Uncharacterized protein.
  
     0.492
BVC80_8855g12
Uncharacterized protein.
  
     0.489
BVC80_8619g13
Tetraspanin/Peripherin.
  
     0.487
BVC80_1101g45
LOB domain-containing protein.
  
     0.484
BVC80_1727g25
GDP-fucose protein O-fucosyltransferase.
  
     0.484
BVC80_1653g83
Cellulose synthase; Belongs to the glycosyltransferase 2 family.
  
     0.480
BVC80_1321g18
X8.
  
     0.477
BVC80_955g7
Uncharacterized protein.
  
     0.477
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.